Etonogestrel and Ethinyl Estradiol side effects: what 22,047 FDA adverse event reports show
Drug class
Progestin
Label matched
Etonogestrel (Nexplanon)
Who reports
22,047 reports · 48% serious · 280 with death outcome · 99% female
Used for
NEXPLANON ® is indicated for prevention of pregnancy in women of reproductive potential for up to 5 years. NEXPLANON is a progestin indicated for prevention of pregnancy in women of reproductive potential for up to 5 years. ( 1 )
What it is
NEXPLANON is a radiopaque, progestin-only, soft, flexible implant preloaded in a sterile, disposable applicator for subdermal use. The implant is white/off-white, non-biodegradable and 4 cm in length with a diameter of 2 mm (see Figure 19 ).
Boxed warning
RISK OF COMPLICATIONS DUE TO IMPROPER INSERTION and REMOVAL Improper insertion of NEXPLANON increases the risk of complications [see Warnings and Precautions (5.1) ] . Proper training prior to first use of NEXPLANON can minimize the risk of improper NEXPLANON insertion [see Warnings and Precautions (5.1) ] .
Causality screen of the 40 strongest signals
What the badges mean
- Labeled — boxed warning The term (or its clinical synonym) appears in the FDA boxed warning: causality is regulator-recognised and considered serious.
- Labeled (related wording) The label describes this effect under different wording (e.g. 'neutropenia' for 'neutrophil count decreased'). Treated as known.
- Reporting / coding artifact An administrative, monitoring or exposure term (product issue, off-label use, 'test normal', overdose...). Not a biological reaction; a high PRR here reflects how reports are coded.
- Lab value / disease marker A laboratory result, investigation or disease-activity marker (antibody positive, CRP abnormal, swollen joint count) not described in the label. These usually mirror the monitored disease or testing protocol rather than a drug effect; not screened further.
- Not in label — unassessed Not found in the label text, not an artifact pattern. This is a genuine candidate for a formal causality assessment (Bradford Hill / WHO-UMC); it has NOT had one here.
Strongest disproportionality signals
Flagged terms (PRR ≥ 2, χ² ≥ 4, n ≥ 10), ranked by PRR; infinite PRRs (no comparator reports) excluded. The EBGM column is a second, shrinkage-based estimate (MGPS) with its 5th percentile EB05 and the BCPNN IC025; a pair flagged by PRR alone is marked PRR-only and should be read as fragile. The strata column recomputes the PRR on serious reports only and flags pairs whose reports are unusually skewed by sex or come mostly from consumers rather than clinicians. 1,106 further terms are in the interactive explorer. Reaction links open the term's cross-drug page.
| Reaction | Reports | PRR 95% CI · ROR · χ²/p | EBGM EB05 · IC025 | Label screen | Serious-only & strata | Trial cross-check |
|---|---|---|---|---|---|---|
| Vaginal mycosis | 116 | 929.6 719.3–1,201.3ROR 934.5 · χ² 53,564 / p <1e-300 | 433.7 EB05 371.4 · IC025 +7.0 3/3 methods agree | Not in label — unassessed | – | not reported in cached trials |
| Contraceptive device complication | 16 | 833.4 425.0–1,634.1ROR 834.0 · χ² 6,608 / p <1e-300 | 289.1 EB05 188.7 · IC025 +4.1 3/3 methods agree | Reporting / coding artifact | serious n=12 | not reported in cached trials |
| Vena cava filter removal | 15 | 781.3 393.8–1,550.1ROR 781.8 · χ² 5,957 / p <1e-300 | 276.4 EB05 177.8 · IC025 +4.0 3/3 methods agree | Not in label — unassessed | serious n=15 | not reported in cached trials |
| Vena cava filter insertion | 137 | 721.6 577.7–901.3ROR 726.1 · χ² 55,304 / p <1e-300 | 386.1 EB05 334.8 · IC025 +7.1 3/3 methods agree | Not in label — unassessed | serious n=137 | not reported in cached trials |
| Venous stent insertion | 28 | 656.3 405.0–1,063.6ROR 657.1 · χ² 10,394 / p <1e-300 | 305.7 EB05 222.0 · IC025 +5.0 3/3 methods agree | Labeled (related wording) related wording | serious n=28 | not reported in cached trials |
| Abnormal withdrawal bleeding | 249 | 360.3 311.5–416.7ROR 364.4 · χ² 64,189 / p <1e-300 | 255.4 EB05 229.9 · IC025 +7.2 3/3 methods agree | Not in label — unassessed | serious n=49 · 71% consumer | not reported in cached trials |
| Medical device site discomfort | 154 | 289.4 241.6–346.5ROR 291.4 · χ² 33,597 / p <1e-300 | 215.5 EB05 188.4 · IC025 +6.7 3/3 methods agree | Not in label — unassessed | serious n=29 | not reported in cached trials |
| Colposcopy | 13 | 283.5 152.4–527.0ROR 283.6 · χ² 2,597 / p <1e-300 | 165.4 EB05 102.9 · IC025 +3.7 3/3 methods agree | Not in label — unassessed | serious n=10 | not reported in cached trials |
| May-thurner syndrome | 40 | 279.9 196.7–398.3ROR 280.4 · χ² 8,346 / p <1e-300 | 195.7 EB05 149.9 · IC025 +5.4 3/3 methods agree | Not in label — unassessed | serious n=39 · 73% consumer | not reported in cached trials |
| Ectropion of cervix | 10 | 275.8 136.3–558.1ROR 275.9 · χ² 1,908 / p <1e-300 | 152.1 EB05 88.3 · IC025 +3.2 3/3 methods agree | Not in label — unassessed | – | not reported in cached trials |
| Withdrawal bleed | 151 | 249.2 208.4–298.1ROR 251.0 · χ² 29,299 / p <1e-300 | 192.3 EB05 167.9 · IC025 +6.6 3/3 methods agree | Not in label — unassessed | serious n=48 · 71% consumer | not reported in cached trials |
| Thrombolysis | 45 | 239.7 172.8–332.5ROR 240.2 · χ² 8,330 / p <1e-300 | 176.9 EB05 137.6 · IC025 +5.5 3/3 methods agree | Not in label — unassessed | serious n=44 · 74% consumer | not reported in cached trials |
| Thrombectomy | 64 | 231.7 176.3–304.5ROR 232.3 · χ² 11,603 / p <1e-300 | 176.3 EB05 142.9 · IC025 +5.8 3/3 methods agree | Not in label — unassessed | serious n=62 | not reported in cached trials |
| Protein s deficiency | 35 | 203.8 141.4–293.7ROR 204.1 · χ² 5,637 / p <1e-300 | 153.7 EB05 115.5 · IC025 +5.1 3/3 methods agree | Not in label — unassessed | serious n=34 | not reported in cached trials |
| Intentional medical device removal by patient | 173 | 202.0 171.5–237.9ROR 203.6 · χ² 28,303 / p <1e-300 | 163.4 EB05 144.0 · IC025 +6.6 3/3 methods agree | Labeled (related wording) related wording | serious n=12 | not reported in cached trials |
| Hypercoagulation | 321 | 191.8 170.2–216.1ROR 194.6 · χ² 50,430 / p <1e-300 | 157.9 EB05 143.9 · IC025 +6.8 3/3 methods agree | Not in label — unassessed | serious n=319 | not reported in cached trials |
| Protein c deficiency | 20 | 175.2 108.7–282.4ROR 175.4 · χ² 2,774 / p <1e-300 | 129.8 EB05 88.7 · IC025 +4.3 3/3 methods agree | Not in label — unassessed | serious n=19 | not reported in cached trials |
| Pulmonary infarction | 338 | 157.2 140.2–176.3ROR 159.6 · χ² 44,796 / p <1e-300 | 133.8 EB05 122.2 · IC025 +6.6 3/3 methods agree | Labeled (related wording) related wording | serious n=338 · 73% consumer | not reported in cached trials |
| Loop electrosurgical excision procedure | 20 | 155.0 96.6–248.7ROR 155.1 · χ² 2,495 / p <1e-300 | 118.4 EB05 80.9 · IC025 +4.2 3/3 methods agree | Reporting / coding artifact | serious n=20 | not reported in cached trials |
| Transverse sinus thrombosis | 68 | 139.8 108.4–180.3ROR 140.2 · χ² 8,035 / p <1e-300 | 117.8 EB05 96.2 · IC025 +5.6 3/3 methods agree | Not in label — unassessed | serious n=67 | not reported in cached trials |
| Thromboembolectomy | 12 | 137.2 74.9–251.4ROR 137.3 · χ² 1,299 / p 9e-285 | 101.0 EB05 61.6 · IC025 +3.4 3/3 methods agree | Not in label — unassessed | serious n=12 | not reported in cached trials |
| Intracranial venous sinus thrombosis | 136 | 136.4 114.0–163.2ROR 137.2 · χ² 15,838 / p <1e-300 | 117.3 EB05 101.6 · IC025 +6.1 3/3 methods agree | Not in label — unassessed | serious n=135 | not reported in cached trials |
| Antiphospholipid antibodies positive | 72 | 134.7 105.3–172.4ROR 135.2 · χ² 8,240 / p <1e-300 | 114.4 EB05 93.9 · IC025 +5.6 3/3 methods agree | Lab value / disease marker | serious n=72 · 72% consumer | not reported in cached trials |
| Protein s decreased | 18 | 130.8 79.9–214.2ROR 130.9 · χ² 1,923 / p <1e-300 | 102.7 EB05 68.7 · IC025 +4.0 3/3 methods agree | Lab value / disease marker | serious n=17 | not reported in cached trials |
| Post thrombotic syndrome | 53 | 126.1 94.7–168.0ROR 126.4 · χ² 5,689 / p <1e-300 | 107.1 EB05 85.0 · IC025 +5.3 3/3 methods agree | Labeled (related wording) related wording | serious n=51 | not reported in cached trials |
| Coagulation factor viii level increased | 17 | 122.6 74.0–203.2ROR 122.7 · χ² 1,707 / p <1e-300 | 97.0 EB05 64.2 · IC025 +3.9 3/3 methods agree | Lab value / disease marker | serious n=17 | not reported in cached trials |
| Breast prosthesis implantation | 11 | 121.3 64.8–227.3ROR 121.4 · χ² 1,058 / p 2e-232 | 91.0 EB05 54.3 · IC025 +3.2 3/3 methods agree | Not in label — unassessed | serious n=11 | not reported in cached trials |
| Chlamydial infection | 84 | 118.6 94.6–148.8ROR 119.1 · χ² 8,592 / p <1e-300 | 103.0 EB05 85.8 · IC025 +5.7 3/3 methods agree | Not in label — unassessed | serious n=68 | not reported in cached trials |
| Ovarian cystectomy | 19 | 112.0 69.6–180.3ROR 112.1 · χ² 1,770 / p <1e-300 | 91.3 EB05 61.7 · IC025 +4.1 3/3 methods agree | Not in label — unassessed | serious n=18 | not reported in cached trials |
| Chlamydia test positive | 12 | 111.4 61.2–202.6ROR 111.5 · χ² 1,077 / p 2e-236 | 86.4 EB05 52.7 · IC025 +3.4 3/3 methods agree | Lab value / disease marker | serious n=9 | not reported in cached trials |
| Medical device discomfort | 321 | 111.1 99.0–124.6ROR 112.7 · χ² 31,219 / p <1e-300 | 98.9 EB05 90.1 · IC025 +6.2 3/3 methods agree | Not in label — unassessed | serious n=24 | not reported in cached trials |
| Genital pruritus female | 34 | 109.5 76.8–156.2ROR 109.7 · χ² 3,178 / p <1e-300 | 93.2 EB05 69.7 · IC025 +4.8 3/3 methods agree | Labeled (related wording) related wording | – | not reported in cached trials |
| Endometrial ablation | 35 | 104.2 73.5–147.7ROR 104.3 · χ² 3,127 / p <1e-300 | 89.4 EB05 67.2 · IC025 +4.8 3/3 methods agree | Not in label — unassessed | serious n=34 | not reported in cached trials |
| Vaginitis bacterial | 63 | 103.6 79.9–134.4ROR 103.9 · χ² 5,674 / p <1e-300 | 90.9 EB05 73.6 · IC025 +5.3 3/3 methods agree | Not in label — unassessed | serious n=51 | not reported in cached trials |
| Withdrawal bleeding irregular | 24 | 101.8 66.8–155.1ROR 101.9 · χ² 2,071 / p <1e-300 | 85.9 EB05 60.7 · IC025 +4.3 3/3 methods agree | Labeled (related wording) related wording | – | not reported in cached trials |
| Female sterilisation | 49 | 100.1 74.6–134.3ROR 100.3 · χ² 4,254 / p <1e-300 | 87.5 EB05 68.8 · IC025 +5.1 3/3 methods agree | Not in label — unassessed | serious n=48 | not reported in cached trials |
| Menstruation normal | 30 | 98.7 67.8–143.7ROR 98.8 · χ² 2,537 / p <1e-300 | 84.7 EB05 62.2 · IC025 +4.6 3/3 methods agree | Reporting / coding artifact | – | not reported in cached trials |
| Unintended pregnancy | 951 | 95.1 89.1–101.5ROR 99.4 · χ² 80,362 / p <1e-300 | 86.3 EB05 81.8 · IC025 +6.3 3/3 methods agree | Labeled — boxed warning exact term | serious PRR 82.4 | not reported in cached trials |
| Trichomoniasis | 13 | 93.8 53.0–165.8ROR 93.8 · χ² 1,002 / p 4e-220 | 76.1 EB05 47.4 · IC025 +3.4 3/3 methods agree | Not in label — unassessed | serious n=12 | not reported in cached trials |
| Superior sagittal sinus thrombosis | 68 | 87.3 68.1–111.9ROR 87.6 · χ² 5,230 / p <1e-300 | 78.3 EB05 63.9 · IC025 +5.3 3/3 methods agree | Not in label — unassessed | serious n=67 | not reported in cached trials |
Trial evidence (ClinicalTrials.gov)
✓ Trial adverse-event data found on ClinicalTrials.gov
Largest completed trials with posted results that list Etonogestrel and Ethinyl Estradiol as a study intervention. The right-hand column of the signal table shows whether each FAERS term was also recorded in these trials, with a real denominator (0 of 40 signal terms matched).
- NCT02616146 — Efficacy and Safety of Etonogestrel + 17β-Estradiol Vaginal Ring and Levonorgestrel-Ethinyl Estradiol Combined (N=2016, PHASE3; 13 AE terms posted; arms: ENG-E2 125 μg/300 μg; LNG-EE 150 μg/30 μg)
Caveats: trial populations, doses and follow-up differ from the reporting population; AE terms are sponsor-coded and matched here by wording; absence from a trial list means the term was not reported above the sponsor's frequency threshold, not that it cannot occur.
Most frequently reported reactions
By raw co-report count, regardless of disproportionality. Common terms here are often the illness itself or generic outcomes.
| Reaction | Reports | PRR 95% CI · ROR · χ²/p | EBGM EB05 · IC025 | Label screen | Serious-only & strata | Trial cross-check |
|---|---|---|---|---|---|---|
| Pulmonary embolism (lung blood clot) | 3,951 | 41.0 39.9–42.2ROR 49.8 · χ² 148,511 / p <1e-300 | 39.4 EB05 38.3 · IC025 +5.2 3/3 methods agree | Labeled adverse reaction exact term | serious PRR 47.7 | NCT02616146: 1/492 (0.2%) on Etonogestrel and Ethinyl Estradiol (serious AE) |
| Deep vein thrombosis (leg blood clot) | 2,663 | 40.4 39.0–41.9ROR 45.8 · χ² 98,379 / p <1e-300 | 38.8 EB05 37.5 · IC025 +5.2 3/3 methods agree | Labeled adverse reaction exact term | serious PRR 42.5 · 70% consumer | NCT02616146: 1/492 (0.2%) on Etonogestrel and Ethinyl Estradiol (serious AE) |
| Inappropriate schedule of drug administration | 2,230 | 30.3 29.1–31.5ROR 33.6 · χ² 61,406 / p <1e-300 | 29.4 EB05 28.4 · IC025 +4.8 3/3 methods agree | Reporting / coding artifact | serious PRR 9.0 | not reported in cached trials |
| No adverse event | 1,589 | 8.6 8.2–9.0ROR 9.2 · χ² 10,642 / p <1e-300 | 8.5 EB05 8.2 · IC025 +3.0 3/3 methods agree | Reporting / coding artifact | serious PRR 2.1 | not reported in cached trials |
| Device expulsion | 1,377 | 20.5 19.5–21.6ROR 21.8 · χ² 25,053 / p <1e-300 | 20.1 EB05 19.2 · IC025 +4.2 3/3 methods agree | Reporting / coding artifact | serious PRR 20.0 | not reported in cached trials |
| Headache | 1,177 | 1.8 1.7–1.9ROR 1.8 · χ² 421 / p 8e-94 | 1.8 EB05 1.7 · IC025 +0.7 | Labeled adverse reaction exact term | serious PRR 3.1 | NCT02616146: 116/1,504 (7.7%) on Etonogestrel and Ethinyl Estradiol |
| Metrorrhagia | 1,140 | 67.1 63.3–71.2ROR 70.7 · χ² 69,268 / p <1e-300 | 62.6 EB05 59.6 · IC025 +5.8 3/3 methods agree | Not in label — unassessed | serious n=222 | not reported in cached trials |
| Nausea | 1,031 | 1.2 1.2–1.3ROR 1.3 · χ² 51 / p 5e-13 | 1.2 EB05 1.2 · IC025 +0.2 | Labeled adverse reaction exact term | serious PRR 1.7 | not reported in cached trials |
| Incorrect drug administration duration | 1,017 | 35.1 33.1–37.4ROR 36.8 · χ² 32,522 / p <1e-300 | 33.9 EB05 32.2 · IC025 +5.0 3/3 methods agree | Reporting / coding artifact | serious PRR 20.5 | not reported in cached trials |
| Unintended pregnancy | 951 | 95.1 89.1–101.5ROR 99.4 · χ² 80,362 / p <1e-300 | 86.3 EB05 81.8 · IC025 +6.3 3/3 methods agree | Labeled — boxed warning exact term | serious PRR 82.4 | not reported in cached trials |
| Depression | 926 | 3.9 3.6–4.1ROR 4.0 · χ² 1,978 / p <1e-300 | 3.8 EB05 3.6 · IC025 +1.8 3/3 methods agree | Labeled adverse reaction exact term | serious PRR 5.5 | not reported in cached trials |
| Anxiety | 879 | 2.9 2.8–3.1ROR 3.0 · χ² 1,133 / p 1e-248 | 2.9 EB05 2.8 · IC025 +1.4 3/3 methods agree | Labeled adverse reaction exact term | serious PRR 4.5 | not reported in cached trials |
| Device breakage | 826 | 20.4 19.1–21.8ROR 21.2 · χ² 14,931 / p <1e-300 | 20.0 EB05 18.9 · IC025 +4.2 3/3 methods agree | Reporting / coding artifact | serious PRR 5.7 | not reported in cached trials |
| Migraine | 821 | 8.3 7.8–8.9ROR 8.6 · χ² 5,237 / p <1e-300 | 8.2 EB05 7.7 · IC025 +2.9 3/3 methods agree | Labeled adverse reaction exact term | serious PRR 15.5 | not reported in cached trials |
| Off label use (used outside approved label) | 724 | 0.8 0.7–0.9ROR 0.8 · χ² 40 / p 1e-10 | 0.8 EB05 0.7 · IC025 -0.5 PRR-only: not supported by EBGM or IC | Reporting / coding artifact | serious PRR 1.5 | not reported in cached trials |
Unlabeled candidate signals
These flagged terms were not found in the FDA label text and do not match an artifact pattern. They are the pairs that would merit a structured assessment (temporality, dose-response, biological plausibility, consistency across databases, trial or cohort evidence). The screen has not done that; string-matching misses label wording, and a strong PRR can still be stimulated reporting, co-medication, or the disease itself.
- Vaginal mycosis — n=116, PRR 929.6
- Vena cava filter insertion — n=137, PRR 721.6
- Abnormal withdrawal bleeding — n=249, PRR 360.3
- Medical device site discomfort — n=154, PRR 289.4
- May-thurner syndrome — n=40, PRR 279.9
- Withdrawal bleed — n=151, PRR 249.2
- Thrombolysis — n=45, PRR 239.7
- Thrombectomy — n=64, PRR 231.7
- Protein s deficiency — n=35, PRR 203.8
- Hypercoagulation — n=321, PRR 191.8
✓ A hand-written Bradford Hill causality assessment exists for this drug: Drospirenone/ethinyl estradiol ↔ Pulmonary embolism (venous thromboembolism).
Want to assess one of these properly? The runbook describes the Bradford Hill / trial-evidence workflow used on the assessment page, and handoff_top1000_signals.csv lists the strongest unassessed pairs across all drugs.
Common questions
What are the most reported side effects of Etonogestrel and Ethinyl Estradiol?
In FDA FAERS, the most frequently co-reported reaction terms for Etonogestrel and Ethinyl Estradiol are pulmonary embolism, deep vein thrombosis, headache, metrorrhagia, nausea, unintended pregnancy. These are report counts, not rates: FAERS has no denominator, reporting is voluntary and uneven, and a term can be reported because of the illness being treated rather than the drug.
Does Etonogestrel and Ethinyl Estradiol have an FDA boxed warning?
Yes. The current FDA label carries a boxed warning: RISK OF COMPLICATIONS DUE TO IMPROPER INSERTION and REMOVAL Improper insertion of NEXPLANON increases the risk of complications [see Warnings and Precautions (5.1) ] . Proper training prior to first use of NEXPLANON can minimize the risk of improper NEXPLANON insertion [see Warnings and Precautions (5.1) ] .
Do FAERS signals prove that Etonogestrel and Ethinyl Estradiol causes these side effects?
No. A disproportionality signal (PRR, ROR) means a reaction is reported more often with this drug than with others in the database. That can reflect a real effect, but also the disease being treated, stimulated reporting after news or litigation, co-medications, or how reports are coded. Causality needs temporality, dose-response, biological plausibility, consistency across data sources and, ideally, trial or cohort evidence. This page screens each term against the FDA label and ClinicalTrials.gov results; it does not establish causation.
Sources & methods
- FDA label via openFDA (set ID 487f8a62-e142-457c-97cc-2e398fde7594, effective 20260528; matched on
openfda.generic_name.exact:"ETONOGESTREL") - Bayesian shrinkage measures computed offline over all 1,317,300 cached pairs: BCPNN information component (IC, with Norén closed-form IC025) and MGPS empirical-Bayes geometric mean (EBGM, EB05) with a two-component gamma prior fitted by maximum marginal likelihood (α₁=0.57, β₁=0.02, α₂=1.42, β₂=0.70, w=0.17); unstratified
- FAERS pair statistics from the OpenPV build of 2026-09-14 (openFDA
count=aggregation, fieldpatient.drug.openfda.generic_name.exact, 1,146 reaction terms, min 3 co-reports); PRR/ROR with 95% CI, chi-square with Yates correction - Serious-only and stratified counts (serious:1, patient.patientsex, primarysource.qualification) from openFDA count queries; serious-only PRR uses the drug serious report total and the term global serious total (N_serious=11,882,979); strata shown only when n ≥ 20
- Seriousness and sex counts from openFDA
count=serious,patient.patientsex,seriousnessdeath - ClinicalTrials.gov API v2 (query
ETONOGESTREL, results-bearing studies sorted by enrollment)
Page generated 2026-10-08. Label and PubChem text are retrieved automatically and may lag the current label; always check the current prescribing information. OpenPV is a beta research tool of the Open Source Medicine Foundation.